- SampleNorm (class in scalr.data.preprocess.sample_norm), [1]
- save_checkpoint() (scalr.nn.callbacks.model_checkpoint.ModelCheckpoint method), [1]
- save_weights() (scalr.nn.model._model.ModelBase method), [1]
-
scalr.analysis._analyser
-
scalr.analysis.dge_lmem
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scalr.analysis.dge_pseudobulk
-
scalr.analysis.evaluation
-
scalr.analysis.gene_recall_curve
-
scalr.analysis.heatmap
-
scalr.analysis.roc_auc
-
scalr.data.preprocess._preprocess
-
scalr.data.preprocess.sample_norm
-
scalr.data.preprocess.standard_scale
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scalr.data.preprocess.test_sample_norm
-
scalr.data.preprocess.test_standard_scale
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scalr.data.split._split
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scalr.data.split.group_splitter
-
scalr.data.split.stratified_group_splitter
-
scalr.data.split.stratified_splitter
-
scalr.data_ingestion_pipeline
-
scalr.eval_and_analysis_pipeline
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scalr.feature.feature_subsetting
-
scalr.feature.scoring._scoring
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scalr.feature.scoring.linear_scorer
-
scalr.feature.scoring.shap_scorer
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scalr.feature.selector._selector
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scalr.feature.selector.abs_mean
-
scalr.feature.selector.classwise_abs
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scalr.feature.selector.classwise_promoters
-
scalr.feature_extraction_pipeline
-
scalr.model_training_pipeline
-
scalr.nn.callbacks
-
scalr.nn.callbacks._callbacks
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-
scalr.nn.callbacks.early_stopping
-
scalr.nn.callbacks.model_checkpoint
-
scalr.nn.callbacks.tensorboard_logger
-
scalr.nn.callbacks.test_early_stopping
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scalr.nn.dataloader._dataloader
-
scalr.nn.dataloader.simple_dataloader
-
scalr.nn.dataloader.simple_metadataloader
-
scalr.nn.dataloader.test_simple_dataloader
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scalr.nn.dataloader.test_simple_metadataloader
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scalr.nn.loss
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scalr.nn.loss._loss
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scalr.nn.model._model
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scalr.nn.model.sequential_model
-
scalr.nn.model.shap_model
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scalr.nn.trainer._trainer
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scalr.nn.trainer.simple_model_trainer
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scalr.utils.data_utils
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scalr.utils.file_utils
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scalr.utils.logger
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scalr.utils.misc_utils
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scalr.utils.test_file_utils
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scalr.utils.test_misc_utils
- ScoringBase (class in scalr.feature.scoring._scoring), [1]
- SelectorBase (class in scalr.feature.selector._selector), [1]
- SequentialModel (class in scalr.nn.model.sequential_model), [1]
- set_data_and_targets() (scalr.eval_and_analysis_pipeline.EvalAndAnalysisPipeline method), [1]
- set_model() (scalr.feature_extraction_pipeline.FeatureExtractionPipeline method), [1]
- set_score_matrix() (scalr.feature_extraction_pipeline.FeatureExtractionPipeline method), [1]
- set_seed() (in module scalr.utils.misc_utils), [1]
- ShapScorer (class in scalr.feature.scoring.shap_scorer), [1]
- SimpleDataLoader (class in scalr.nn.dataloader.simple_dataloader), [1]
- SimpleMetaDataLoader (class in scalr.nn.dataloader.simple_metadataloader), [1]
- SimpleModelTrainer (class in scalr.nn.trainer.simple_model_trainer), [1]
- SplitterBase (class in scalr.data.split._split), [1]
- StandardScaler (class in scalr.data.preprocess.standard_scale), [1]
- StratifiedGroupSplitter (class in scalr.data.split.stratified_group_splitter), [1]
- StratifiedSplitter (class in scalr.data.split.stratified_splitter), [1]
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