All modules for which code is available

• scalr.analysis._analyser
• scalr.analysis.dge_lmem
• scalr.analysis.dge_pseudobulk
• scalr.analysis.evaluation
• scalr.analysis.gene_recall_curve
• scalr.analysis.heatmap
• scalr.analysis.roc_auc
• scalr.data.preprocess._preprocess
• scalr.data.preprocess.sample_norm
• scalr.data.preprocess.standard_scale
• scalr.data.preprocess.test_sample_norm
• scalr.data.preprocess.test_standard_scale
• scalr.data.split._split
• scalr.data.split.group_splitter
• scalr.data.split.stratified_group_splitter
• scalr.data.split.stratified_splitter
• scalr.data_ingestion_pipeline
• scalr.eval_and_analysis_pipeline
• scalr.feature.feature_subsetting
• scalr.feature.scoring._scoring
• scalr.feature.scoring.linear_scorer
• scalr.feature.scoring.shap_scorer
• scalr.feature.selector._selector
• scalr.feature.selector.abs_mean
• scalr.feature.selector.classwise_abs
• scalr.feature.selector.classwise_promoters
• scalr.feature_extraction_pipeline
• scalr.model_training_pipeline
• scalr.nn.callbacks._callbacks
• scalr.nn.callbacks.early_stopping
• scalr.nn.callbacks.model_checkpoint
• scalr.nn.callbacks.tensorboard_logger
• scalr.nn.callbacks.test_early_stopping
• scalr.nn.dataloader._dataloader
• scalr.nn.dataloader.simple_dataloader
• scalr.nn.dataloader.simple_metadataloader
• scalr.nn.dataloader.test_simple_dataloader
• scalr.nn.dataloader.test_simple_metadataloader
• scalr.nn.loss._loss
• scalr.nn.model._model
• scalr.nn.model.sequential_model
• scalr.nn.model.shap_model
• scalr.nn.trainer._trainer
• scalr.nn.trainer.simple_model_trainer
• scalr.utils.data_utils
• scalr.utils.file_utils
• scalr.utils.logger
• scalr.utils.misc_utils
• scalr.utils.test_file_utils
• scalr.utils.test_misc_utils